Protein Prediction Part 2 : Structure Comparative modelling ( 2 )
نویسندگان
چکیده
منابع مشابه
Comparative modelling of 3D-structure of Geobacter sp. M21 (a metal reducing bacteria) Mn-Fe superoxide dismutase and its binding properties with bisphenol-A, aminotriazole and ethylene-diurea
Superoxide dismutase play important roles in iron-respiratory bacteria such as Geobacteraceae as an antioxidant defense, and probably an effective enzyme of electron transfer network. Regarding the application of iron-respiratory bacteria in environmental biotechnology particularly biodegradation and bioremediation, understanding the mechanism of inhibition/induction of superoxide dismutase by ...
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We describe new algorithms and modules for protein structure prediction available as part of the PROTINFO web server. The modules, comparative and de novo modelling, have significantly improved back-end algorithms that were rigorously evaluated at the sixth meeting on the Critical Assessment of Protein Structure Prediction methods. We were one of four server groups invited to make an oral prese...
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The state of the art of the field of protein structure prediction is reviewed. The strengths and weaknesses of the three general approaches, comparative modelling, threading and template-freemodelling, are discussed, and an overview of the results of the critical assessment of structure prediction (CASP) protein structure prediction experiments are summarized. The implications for protein struc...
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The gap between the number of protein sequences and protein structures is increasing rapidly, exacerbated by the completion of numerous genome projects now flooding into public databases. To fill this gap, comparative protein modelling is widely considered the most accurate technique for predicting the three-dimensional shape of proteins. High-throughput, automatic protein modelling should cons...
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This thesis focus on the prediction of RNA secondary structure using stochastic context-free grammars (SCFG). The RNA secondary structure prediction problem consists of predicting a 2-dimensional structure from a 1-dimensional nucleotide sequence. The theory behind SCFG is explained and an overview of the research literature on various methods in the field of secondary structure prediction is g...
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